CDS
| Accession Number | TCMCG066C29598 |
| gbkey | CDS |
| Protein Id | XP_034603499.1 |
| Location | complement(join(34950698..34950775,34950861..34950989,34951090..34951175,34951279..34951354,34951475..34951618,34951715..34951852,34952217..34952317,34952603..34952705,34952901..34953026,34953174..34953251,34953340..34953492,34953806..34953907,34953996..34954063,34954782..34954890,34954995..34955156)) |
| Gene | LOC117863768 |
| GeneID | 117863768 |
| Organism | Setaria viridis |
Protein
| Length | 550aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA633601 |
| db_source | XM_034747608.1 |
| Definition | signal recognition particle 54 kDa protein, chloroplastic-like [Setaria viridis] |
EGGNOG-MAPPER Annotation
| COG_category | U |
| Description | SRP54-type protein, helical bundle domain |
| KEGG_TC | 3.A.5.1,3.A.5.2,3.A.5.7,3.A.5.8,3.A.5.9 |
| KEGG_Module |
M00335
[VIEW IN KEGG] |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko00002 [VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko02044 [VIEW IN KEGG] |
| KEGG_ko |
ko:K03106
[VIEW IN KEGG] |
| EC |
3.6.5.4
[VIEW IN KEGG]
[VIEW IN INGREDIENT] |
| KEGG_Pathway |
ko02024
[VIEW IN KEGG] ko03060 [VIEW IN KEGG] ko03070 [VIEW IN KEGG] map02024 [VIEW IN KEGG] map03060 [VIEW IN KEGG] map03070 [VIEW IN KEGG] |
| GOs | - |
Sequence
| CDS: ATGGACGCCACCGCGCTCGCGCTCTACTCTCCCCCGGCGGCGGTGGTCACCCGCTGCTCCCCGGAGAAGCTAGCCTTCGCCTCCCTACACCTTCCCTGCTCCTCCACAGGCTCGTTCCACCTCCGCGCGTCCCGGAACCCAGCCTTGCGCGCCCTCTCTCTGGGATGGAGGAGACGCAGGAGGAGGGGGAACGGGTTGGTTGTGCGGGCGGAGATGTTTGGGCAGCTCACCACGGGACTCGAGTCCGCCTGGAACAAGCTGCGTGGCGTCGACGTGCTAACAAAGGAAAATATCACTGAACCAATGCGGGACATTAGAAGGTCACTTCTGGAAGCAGATGTTAGTCTGCCAGTTGTGAGACGTTTTGTTTCATCCATTAGCGAAAAGGCTTTAGGTGCAGATACTATCAAAGGAGTTCGACCAGACCAGCAACTAGTGAAGATTGTGCATGACGAACTTGTACAACTGATGGGTGGAGAAGTATCTGATCTGGTATTTGCAAAAAGTGGCCCGACAGTTATCTTACTGGCAGGTCTACAAGGTGTTGGGAAGACTACTGTTTGTGCAAAGCTTGCATTCTATTTGAAGAAACTGGGGAAGAGCTGTATGCTGGTCGCTGCAGATGTTTACAGGCCTGCTGCCATTGATCAACTTACTATACTGGGTGAACAGGTGGGTGTACCAGTTTACTCAGAAGGAATGGGGGCCAAACCTCCACAGATAACCAAGAATGCTGTGGAAGAAGCGAAAAGCAAGAATATTGATGCCATTGTGGTAGATACTGCTGGAAGACTGCAGATTGATAAAGCGATGATGGATGAACTGAAAGAAGTGAAGAAGGCAGTTAATCCTACTGAGGTACTGCTTGTTGTTGATGCCATGACTGGCCAAGAAGCTGCAGCACTTGTCACCACCTTCAATATTGAGATTGGTATCACTGGAGCCATACTTACTAAACTGGACGGTGATTCCAGGGGTGGAGCAGCACTAAGTGTTAAAGAGGTATCTGGAAGGCCCATTAAATTTGTAGGACGCGGAGAACGATTGGAGGACCTCGAGCTTTTCTATCCTGATCGCATGGCGCAACGAGTTTTGGGAATGGGAGATGTACTTTCATTTGTCGAAAAAGCACAAGAAGTTATGCGGCAAGAAGAAGCTGTAGAATTACAGAAGAAAATTATGAGTGCAAAGTTCGACTTCAATGACTTCTTAAAGCAATCTCAAAATGTTGCAAAGATGGGTTCCATGAGCCGAGTAATTGGGATGATTCCTGGCATGAACAAGGTTACTCCTGCACAAATAAGAGAAGCTGAGAAAAGACTTGCATTTGTGGAGTCAATGATTAATGCAATGACTGCCGAGGAAAGAGAGAAGCCTGAGTTACTAGCCGAATCACGCGAAAGGAGGATAAGAGTGGCTGAGGAGTCTGGAAAGACCGAGCAAGAGGTGAGCCAACTGGTTGCTCAACTTTTCCAAATGCGTGCTCAGATGCAGAAATTGATGGGTATGGTGCAAGGACAAGAAGCAATAGCAGGCATGGGAGACCTCATGGACTCACTTAAAGCTGAAGAAAAGGCACCACCTGGCACCGCACGGCGGAGGAGGAGGAACATCAAGCCGAAGCAGAGGAACCTGGATGCAGTTTTGAGCTAG |
| Protein: MDATALALYSPPAAVVTRCSPEKLAFASLHLPCSSTGSFHLRASRNPALRALSLGWRRRRRRGNGLVVRAEMFGQLTTGLESAWNKLRGVDVLTKENITEPMRDIRRSLLEADVSLPVVRRFVSSISEKALGADTIKGVRPDQQLVKIVHDELVQLMGGEVSDLVFAKSGPTVILLAGLQGVGKTTVCAKLAFYLKKLGKSCMLVAADVYRPAAIDQLTILGEQVGVPVYSEGMGAKPPQITKNAVEEAKSKNIDAIVVDTAGRLQIDKAMMDELKEVKKAVNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGRPIKFVGRGERLEDLELFYPDRMAQRVLGMGDVLSFVEKAQEVMRQEEAVELQKKIMSAKFDFNDFLKQSQNVAKMGSMSRVIGMIPGMNKVTPAQIREAEKRLAFVESMINAMTAEEREKPELLAESRERRIRVAEESGKTEQEVSQLVAQLFQMRAQMQKLMGMVQGQEAIAGMGDLMDSLKAEEKAPPGTARRRRRNIKPKQRNLDAVLS |